Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3043
Gene Symbol: HBB
HBB
0.800 GeneticVariation disease BEFREE <b>Introduction</b>: Sickle cell disease (SCD) is caused by a mutation in the HBB gene which is key for making a component of hemoglobin. 31847604 2020
Entrez Id: 3043
Gene Symbol: HBB
HBB
0.800 GeneticVariation disease BEFREE Sickle cell disease (SCD) is a group of inherited disorders affecting red blood cells, which is caused by a single mutation that results in substitution of the amino acid valine for glutamic acid in the sixth position of the β-globin chain of hemoglobin. 31842406 2019
Entrez Id: 3043
Gene Symbol: HBB
HBB
0.800 GeneticVariation disease BEFREE To develop a high throughput DNA based confirmatory assay for SCD and to detect mutations in the HBB gene. 31830127 2019
Entrez Id: 1727
Gene Symbol: CYB5R3
CYB5R3
0.010 Biomarker disease BEFREE These are the first studies to establish involvement of SMC CYB5R3 in SCD-associated development of PH, which can exist in mice by 5 weeks of SMC CYB5R3 protein deficiency. 31821458 2019
Entrez Id: 146227
Gene Symbol: BEAN1
BEAN1
0.010 Biomarker disease BEFREE <b>Methods:</b> We performed whole-brain voxel-based morphometry (VBM) analysis on 3-dimensional T1-weighted images obtained from 23 patients with SCD [Spinocerebellar ataxia type 6 (SCA6), 31 (SCA31), 3/Machado-Joseph disease (SCA3/MJD), and sporadic cortical cerebellar atrophy (CCA)] and 21 sex- and age-matched healthy controls (HC group). 31803128 2019
Entrez Id: 7084
Gene Symbol: TK2
TK2
0.010 Biomarker disease BEFREE <b>Methods:</b> We performed whole-brain voxel-based morphometry (VBM) analysis on 3-dimensional T1-weighted images obtained from 23 patients with SCD [Spinocerebellar ataxia type 6 (SCA6), 31 (SCA31), 3/Machado-Joseph disease (SCA3/MJD), and sporadic cortical cerebellar atrophy (CCA)] and 21 sex- and age-matched healthy controls (HC group). 31803128 2019
Entrez Id: 3043
Gene Symbol: HBB
HBB
0.800 GeneticVariation disease BEFREE Biochemical and Molecular analysis of the beta-globin gene on Saudi sickle cell anemia. 31762599 2019
Entrez Id: 6006
Gene Symbol: RHCE
RHCE
0.070 GeneticVariation disease BEFREE Two children developed antibodies after enrollment; one warm autoantibody following limited "CEK" matched RBCs and one patient with a hemizygous variant RHD allele developed anti-D. Six (30%) patients with SCD had variant RHCE alleles; two had homozygous variant alleles and four had a variant present along with a wild type allele. 31758587 2020
Entrez Id: 6007
Gene Symbol: RHD
RHD
0.060 GeneticVariation disease BEFREE Two children developed antibodies after enrollment; one warm autoantibody following limited "CEK" matched RBCs and one patient with a hemizygous variant RHD allele developed anti-D. Six (30%) patients with SCD had variant RHCE alleles; two had homozygous variant alleles and four had a variant present along with a wild type allele. 31758587 2020
Entrez Id: 4803
Gene Symbol: NGF
NGF
0.010 Biomarker disease BEFREE Brain-derived neurotrophic factor (BDNF) is a nerve growth factor associated with neuronal survival, synaptic plasticity, elevated transcranial Doppler (TCD) velocities and increased risk of stroke in patients with SCD. 31736231 2020
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.010 AlteredExpression disease BEFREE BDNF levels significantly increased over time in SCD participants. 31736231 2020
Entrez Id: 89765
Gene Symbol: RSPH1
RSPH1
0.010 Biomarker disease BEFREE In a cross sectional, single session study of 186 African American outpatients with SCD pain (age 18-74 years, 59% female) and 124 healthy age, gender, and race matched control subjects (age 18-69 years, 49% female), we compared responses to standard thermal (Medoc TSA II) and mechanical stimuli (von Frey filaments). 31733363 2019
Entrez Id: 552
Gene Symbol: AVPR1A
AVPR1A
0.010 GeneticVariation disease BEFREE In patients with SCD, clinical factors such as pain and stress have been associated with increased health care utilization, but it is not known if the presence of the AVPR1A SNP plays a role in this observation. 31710639 2019
Entrez Id: 3048
Gene Symbol: HBG2
HBG2
0.200 AlteredExpression disease BEFREE Induction of fetal hemoglobin (HbF) via clustered regularly interspaced short palindromic repeats/Cas9-mediated disruption of DNA regulatory elements that repress γ-globin gene (HBG1 and HBG2) expression is a promising therapeutic strategy for sickle cell disease (SCD) and β-thalassemia, although the optimal technical approaches and limiting toxicities are not yet fully defined. 31698466 2019
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker disease BEFREE Electroporation of Cas9 single guide RNA ribonucleoprotein complex into normal and SCD donor CD34+ hematopoietic stem and progenitor cells resulted in high frequencies of on-target mutations and the induction of HbF to potentially therapeutic levels in erythroid progeny generated in vitro and in vivo after transplantation of hematopoietic stem and progenitor cells into nonobese diabetic/severe combined immunodeficiency/Il2rγ-/-/KitW41/W41 immunodeficient mice. 31698466 2019
Entrez Id: 3047
Gene Symbol: HBG1
HBG1
0.100 AlteredExpression disease BEFREE Induction of fetal hemoglobin (HbF) via clustered regularly interspaced short palindromic repeats/Cas9-mediated disruption of DNA regulatory elements that repress γ-globin gene (HBG1 and HBG2) expression is a promising therapeutic strategy for sickle cell disease (SCD) and β-thalassemia, although the optimal technical approaches and limiting toxicities are not yet fully defined. 31698466 2019
Entrez Id: 3047
Gene Symbol: HBG1
HBG1
0.100 GeneticVariation disease BEFREE Thus, we focused on this article on the study of the 5' upstream region of HBG1 among SCD pediatric patients with high levels of HbF. 31688634 2020
Entrez Id: 3043
Gene Symbol: HBB
HBB
0.800 GeneticVariation disease BEFREE Sickle cell disease is one of the most common severe monogenic disorders in the world, due to the inheritance of two abnormal haemoglobin (beta globin) genes. 31684693 2019
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.380 Biomarker disease BEFREE We observed that long-term (5.5 months) oral treatment with pyridoxamine significantly diminished the adhesive function of neutrophils and platelets and down-regulated the expression of E-selectin and intercellular adhesion molecule-1 on the vascular endothelium in tumor necrosis factor-α-challenged sickle cell disease mice. 31672902 2019
Entrez Id: 6401
Gene Symbol: SELE
SELE
0.040 AlteredExpression disease BEFREE We observed that long-term (5.5 months) oral treatment with pyridoxamine significantly diminished the adhesive function of neutrophils and platelets and down-regulated the expression of E-selectin and intercellular adhesion molecule-1 on the vascular endothelium in tumor necrosis factor-α-challenged sickle cell disease mice. 31672902 2019
Entrez Id: 3383
Gene Symbol: ICAM1
ICAM1
0.010 AlteredExpression disease BEFREE We observed that long-term (5.5 months) oral treatment with pyridoxamine significantly diminished the adhesive function of neutrophils and platelets and down-regulated the expression of E-selectin and intercellular adhesion molecule-1 on the vascular endothelium in tumor necrosis factor-α-challenged sickle cell disease mice. 31672902 2019
Entrez Id: 116519
Gene Symbol: APOA5
APOA5
0.010 GeneticVariation disease BEFREE Polymorphisms in genes that affect the variation of lipid levels in a Brazilian pediatric population with sickle cell disease: rs662799 APOA5 and rs964184 ZPR1. 31670185 2020
Entrez Id: 8882
Gene Symbol: ZPR1
ZPR1
0.010 GeneticVariation disease BEFREE The G-risk allele rs964184/ZPRI ZNF259/ZPR1 gene (GC + GG genotypes) was associated with increased levels of TG in children ≥10 years old (p = 0.045) and the atherogenic ratio TG/HDL-C (p = 0.032) in SCD. 31670185 2020
Entrez Id: 1121
Gene Symbol: CHM
CHM
0.010 Biomarker disease BEFREE Hydroxyurea to lower TCD velocities and prevent primary stroke: the Uganda NOHARM sickle cell anemia cohort. 31649130 2019
Entrez Id: 7450
Gene Symbol: VWF
VWF
0.060 Biomarker disease BEFREE Accordingly, factors both upstream and downstream of thrombin, such as the tissue factor-FX complex, fibrinogen, platelets, von Willebrand factor, FXII, high-molecular-weight kininogen, etc, also play important roles in SCD pathogenesis. 31648337 2019